The course consists of two main modules:
- mathematical modelling in ecology and systems biology
- agent-based modelling in complex systems
- molecular dynamics of biological molecules
The Mathematical Modelling Module will provide an introduction to mathematical modelling in ecology and systems biology. It will teach how to model the dynamical aspects of ecological populations and molecular systems. During this module, you will have ample opportunities to interpret and analyze simple mathematical models using algebra (high school level) and computer software. After completing this module, you will be able to read and interpret modelling papers in ecology and systems biology.
The Agent-Based Modelling Module will provide an introduction to agent-based modelling in complex systems. It will teach how to model spatial pattern formation and self-organisation in complex systems. It will involve a series of computer-based exercises, during which you will have the opportunity to modify some simple computer programs for simulating complex systems.
The Molecular Dynamics Module will provide an understanding of how the chemical and structural properties of molecules and their dynamics are represented mathematically and computationally. During this module, you will have the opportunity to modify and even write some simple code for simulating molecular dynamics, as well as use the sophisticated programs used by researchers to simulate biological molecules such as proteins.